Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs5743708
rs5743708
0.525 0.800 4 153705165 missense variant G/A snv 1.7E-02 1.8E-02
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.080 1.000 8 2010 2019
dbSNP: rs4986790
rs4986790
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.060 1.000 6 2004 2019
dbSNP: rs3804099
rs3804099
0.627 0.680 4 153703504 synonymous variant T/C snv 0.40 0.48
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.040 0.750 4 2013 2019
dbSNP: rs1800450
rs1800450
0.662 0.640 10 52771475 missense variant C/T snv 0.14 0.11
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.030 0.667 3 2014 2019
dbSNP: rs1800451
rs1800451
0.776 0.240 10 52771466 missense variant C/T snv 3.2E-02 7.9E-02
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.030 1.000 3 2011 2019
dbSNP: rs3764880
rs3764880
0.752 0.320 X 12906707 start lost A/G snv 0.31 0.30
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.030 1.000 3 2011 2019
dbSNP: rs11003125
rs11003125
0.790 0.480 10 52772254 upstream gene variant G/C snv 0.31
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.020 0.500 2 2017 2019
dbSNP: rs1544410
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.020 1.000 2 2017 2019
dbSNP: rs352139
rs352139
0.732 0.320 3 52224356 intron variant T/C snv 0.51 0.54
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.020 1.000 2 2015 2019
dbSNP: rs5030737
rs5030737
0.752 0.360 10 52771482 missense variant G/A snv 5.6E-02 5.0E-02
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.020 1.000 2 2019 2019
dbSNP: rs7095891
rs7095891
0.882 0.120 10 52771701 upstream gene variant G/A snv 0.30
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.020 1.000 2 2019 2019
dbSNP: rs7096206
rs7096206
0.708 0.480 10 52771925 upstream gene variant G/A;C;T snv
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.020 0.500 2 2014 2019
dbSNP: rs1010
rs1010
0.807 0.120 2 85581859 3 prime UTR variant T/C;G snv
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019
dbSNP: rs10759932
rs10759932
0.732 0.560 9 117702866 upstream gene variant T/C snv 0.18
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019
dbSNP: rs10841845
rs10841845
0.925 0.200 12 8533837 3 prime UTR variant A/G snv 0.28
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019
dbSNP: rs10841847
rs10841847
1.000 0.080 12 8535216 intron variant A/G snv 0.58
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019
dbSNP: rs15493
rs15493
1.000 0.080 14 67651415 missense variant C/G;T snv 9.2E-02 8.8E-02
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019
dbSNP: rs1927906
rs1927906
1.000 0.080 9 117717837 3 prime UTR variant T/C snv 0.20
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019
dbSNP: rs2228570
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019
dbSNP: rs2367707
rs2367707
0.925 0.080 4 74382717 synonymous variant A/G snv 0.79 0.79
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019
dbSNP: rs2737190
rs2737190
0.827 0.120 9 117701903 upstream gene variant G/A snv 0.52
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019
dbSNP: rs4988453
rs4988453
0.851 0.200 3 38137763 upstream gene variant C/A;T snv
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019
dbSNP: rs549908
rs549908
0.752 0.440 11 112150193 synonymous variant T/A;G snv 4.2E-06; 0.29
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019
dbSNP: rs731236
rs731236
VDR
0.542 0.760 12 47844974 synonymous variant A/G snv 0.33 0.34
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019
dbSNP: rs7975232
rs7975232
VDR
0.576 0.760 12 47845054 intron variant C/A snv 0.51 0.55
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 1.000 1 2019 2019